Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890980.1_cds_XP_016445674.1_40616
CDS Infomation

[gene=LOC107770853] [db_xref=GeneID:107770853] [protein=DEAD-box ATP-dependent RNA helicase 56-like] [protein_id=XP_016445674.1] [location=complement(join(71062..71072,71626..71689,71791..71874,71971..72115,72952..73136,73218..73274,73841..73959,74065..74296,74414..74586,76860..76960,77854..77969))] [gbkey=CDS]
Sequence

ATGGGAGAGAACAAGGAGAACGATGCATATGAAGAGGAGCTGCTCGACTATGAAGAAGAT
GATGAAAAACTCCCTGATTCCGTCACCGGAAAAGTCAACGGCGATTCCGCCAAAAAGGGT
TATGTTGGTATTCACAGTTCGGGTTTCAGAGATTTTCTTCTAAAGCCAGAGCTATTGCGG
GCTATTGTGGACTCTGGGTTTGAGCATCCTTCCGAAGTGCAACATGAGTGTATTCCACAA
GCTATTCTGGGAATGGATGTTATTTGCCAAGCTAAATCTGGAATGGGGAAAACCGCTGTT
TTTGTTCTTTCAACTCTGCAACAGATTGAACCTGTTGCTGGTCAGGTTGCTGCCCTGATT
CTCTGTCACACTAGGGAATTAGCTTATCAGATCTGTCATGAGTTTGAGAGGTTCAGCACA
TATCTGCCCGATATCAAGGTTGCTGTTTTCTACGGTGGTGTCAACATCAAACTCCACAAG
GAGCTGCTGAAGAATGAGTGTCCGCATATTGTCGTTGGAACTCCTGGAAGAGTACTTGCA
TTGGCAAGAGACAAGGACCTGTCTTTGAGGAATGTGAGGCATTTTATACTAGATGAGTGT
GACAAGATGCTTGAATCACTTGACATGAGGAGAGACGTGCAGGAAATCTTCAAAATGACT
CCTCATGACAAGCAAGTCATGATGTTTTCTGCAACTCTCAGCAAGGAGATTCGCCCGGTT
TGCAAGAAATTCATGCAAGATCCAATGGAAATTTATGTTGACGATGAGGCCAAGTTGACC
CTGCATGGACTTGTACAGCACTACATCAAATTGAGTGAAACTGAGAAAAACAGGAAGCTG
AATGACCTGTTGGATGCTTTGGACTTCAACCAAGTTGTTATTTTTGTCAAGAGTGTGAGC
AGAGCTGCAGAGTTGAATAAGTTACTTGTGGAGTGTAATTTTCCATCTATCTGCATCCAC
TCTGGCATGACTCAGGAAGAAAGACTGACACGCTACAAGGGTTTCAAGGAAGGGCACAAG
AGAATTCTTGTGGCGACTGATTTGGTTGGGAGAGGCATAGACATTGAAAGGGTGAACATT
GTCATTAACTATGACATGCCAGATTCTGCAGATACTTACCTTCACAGAGTGGGAAGAGCT
GGTAGATTTGGAACCAAAGGCCTTGCCATAACATTTGTGTCCTCTGCATCAGATTCTGAT
GTTCTCAATCAGGTTCAGGAGAGGTTTGAAGTGGATATTAAAGAACTTCCTGAGCAGATT
GACACTTCTACATACATGCCATCTTAG

Peptide Sequence

PEP ID

XP_016445674.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Nicotiana tabacum]
Sequence

MGENKENDAYEEELLDYEEDDEKLPDSVTGKVNGDSAKKGYVGIHSSGFRDFLLKPELLR
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALI
LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKLHKELLKNECPHIVVGTPGRVLA
LARDKDLSLRNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSETEKNRKLNDLLDALDFNQVVIFVKSVS
RAAELNKLLVECNFPSICIHSGMTQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI
DTSTYMPS

Transcript Sequence

Gene sequence data has not been registered.